Installation of dnaMD
dnaMD can be installed from source or directly from PyPI repository (pip). We recommend to use pip.
Package required after installation: These packages are installed automatically during dnaMD installation.
Install using pip
Execute following command to install with Python-2.x version:
sudo pip install dnaMD
Execute following command to install with Python-3.x version:
sudo pip3 install dnaMD
Updating dnaMD using pip
To update the dnaMD use following command:
pip install --upgrade --no-deps dnaMD
pip3 install --upgrade --no-deps dnaMD
--upgrade flag is used to update the package and
update of dependent packages like numpy, scipy, matplotlib etc.
Install from source
Download do_x3dna package as described here.
Follow these steps to install with Python-2.x version:
cd do_x3dna cd dnaMD sudo python setup.py install
Follow these steps to install with Python-3.x version:
cd do_x3dna cd dnaMD sudo python3 setup.py install